Manipulate and stretch single pectin molecules with modified molecular combing and fluid fixation techniques
نویسندگان
چکیده
Manipulating and stretching single pectin molecules offer convenience to determine the chain lengths and further illustrate the action between pectins and other macromolecules. Pectin molecules on mica surfaces, which were imaged in air with atomic force microscopy (AFM), can be aligned and stretched through applying modified molecular combing and fluid fixation techniques. Modified molecular combing showed more effective and powerful for manipulation than fluid fixation. Chelate-soluble pectin (CSP) can be straightened into line to one direction by molecular combing while sodium carbonate-soluble pectin (SSP) shows ‘V’ structures. The differences may be the result of the different parts of the pectins which touched the mica surface firstly during the dropping, and the lengths of the chains. CSP was relatively long and initially touched the mica with the end point while SSP was short and touched the mica firstly with its middle part.
منابع مشابه
Sizing and Sorting of Single Dna Molecules by Microfluidic Molecular Combing Device
We report a microfluidic molecular combing device to trap, stretch, and separate DNA at a singlemolecule resolution. In order to align long DNA into a single direction on surface, we demonstrated molecular combing by dewetting DNA solution inside a microfluidic channel. It used a surface tensional force at the air-water interface of DNA solution translating on a fabricated pattern (zigzag line)...
متن کاملCombing Large DNAs on Surfaces using the Nano eNablerTM System #105
Several methods have been employed to comb/stretch single DNA molecules such as magnetic [1] and laser tweezers [2], movement of an air-water interface [3] and air jet guided fluid flow [4]. However, the scientific community still lacks a feasible technique to directly deposit and comb large DNA molecules on surfaces. A novel method to comb large DNA molecules at the micron and ultramicro scale...
متن کاملA Study on Plant Polymer: Pectin Production and Modification (RESEARCH NOTE)
Abstract Pectin from two different plant sources: apple and sugar beet was studied. Apple pectinwas modified by chemical treatments such as: acid, alkali and ammonia, so as to obtain an ester levelequal to or less than 50 %, which is described as low methoxyl (LM) pectin. LM pectin form gelswith significant characteristic. In this study, de-esterification of apple pectin with acid treatmentresu...
متن کاملTransport of a Liquid Water-Methanol Mixture in a Single Wall Carbon Nanotube
In this work, a molecular dynamics simulation of the transport of water - methanol mixture through the single wall carbon nanotube (SWCNT) is reported. Methanol and water are selected as fluid molecules since water represents a strongly polar molecule while methanol is as an intermediate between polar and strongly polar molecules. Some physical properties of the methanol-water mixture such as r...
متن کاملA simple DNA stretching method for fluorescence imaging of single DNA molecules
Stretching or aligning DNA molecules onto a surface by means of molecular combing techniques is one of the critical steps in single DNA molecule analysis. However, many of the current studies have focused on lambda-DNA, or other large DNA molecules. There are very few studies on stretching methodologies for DNA molecules generated via PCR (typically smaller than 20 kb). Here we describe a simpl...
متن کامل